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Bioconductor / bioc_docker

[DEPRECATED] Docker containers for Bioconductor
https://github.com/bioconductor/bioconductor_docker
Artistic License 2.0
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RStudio update needed on devel docker containers? #18

Closed seandavi closed 7 years ago

seandavi commented 7 years ago

I see this when working with the current devel_core2 container:

R graphics engine version 12 is not supported by this version of RStudio. The Plots tab will be disabled until a newer version of RStudio is installed.
lshep commented 7 years ago

I don't believe this to be a problem with the docker but with the version of Rstudio you are using. As far as I am aware we don't download the Rstudio version on the docker image; did you do this separately?

seandavi commented 7 years ago

Thanks, @lshep. The bioc_devel containers look like they inherit from rocker/rstudio-daily. I'll focus there instead. Sorry about the noise.

lshep commented 7 years ago

There was an update on their docker on monday, I don't know if it happened before or after our build so I will try rebuilding our images as well.

seandavi commented 7 years ago

Does this help?

https://docs.docker.com/docker-hub/builds/#repository-links

stianlagstad commented 7 years ago

I realize this is not a Bioconductor issue, but do any of you have tips for how to get around it? I'm getting the error with both Rstudio version 1.0.136 and with version 1.1.105 (which I believe is the daily build).