Balancing build time for mscore and protmetcore

Bioconductor / bioc_docker

[DEPRECATED] Docker containers for Bioconductor

https://github.com/bioconductor/bioconductor_docker

Artistic License 2.0

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Balancing build time for mscore and protmetcore #64

Closed sneumann closed 5 years ago

sneumann commented 5 years ago

Hi @lgatto , on dockerhub, protmetcore has timeouts. Here I moved packages from protmetcore to mscore, so we now have the following timings:

devel_mscore: 44:54.00 elapsed
devel_protmetcore 49:24.80 elapsed

Downside is that the moved packages are not necessarily mscore by nature. What do you think ? Yours, Steffen

lshep commented 5 years ago

Was waiting for @lgatto feedback but if there are no objections I'll look at merging this this week - sorry for the long delay.

lshep commented 5 years ago

FWIW - This seem to help get protmetcore to build at least once in release and devel - however it seems to be right on the verge of timeout - as a rerun yesterday failed but previously success and seemed to fail on the last step before completely comparing the build reports - I'm rerunning them (protmetcore devel/release) again now to hopefully get them to build but thought I pass on this observation