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Bioconductor / bioconductor_docker

Docker Containers for Bioconductor
https://bioconductor.org/help/docker/
Artistic License 2.0
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Add experimental docker compose file #26

Closed nturaga closed 3 years ago

nturaga commented 3 years ago

This docker-compose file allows users to start up the bioconductor_docker image using the command 

docker-compose up

The environment variables are configured in the docker-compose.yaml file, so the user doesn't have to define 'PASSWORDandPORT`.

The volume for libraries is autoconfigured to be stored on the users $HOME location under $HOME/R/bioconductor_docker/<bioconductor_version>.

This has been tested on Windows machines as well, and the volume mount seems to work in a similar way to Linux machines.

nturaga commented 3 years ago

I think both issues raised are fixed @mtmorgan. I've added container name and theexec` documentation.