Closed fortune9 closed 1 year ago
Please provide the command you used to invoke docker on the container. You say the command "R" fails in a container started with docker run ... bash? Please give the version of your docker client also. Thanks.
Thank you for the quick reply, @vjcitn .
I initiated the docker container using the following command:
docker run -it --rm bioconductor/bioconductor_docker:RELEASE_3_16 bash
And then run the commands in my first post.
Update
Actually, after I posted the issue here, I did some google search and found a fix.
The issue seemed due to my old version of docker, which was 20.10.8. After I updated the docker engine to 20.10.21 instructions here, the issue was fixed.
Thank you for your help all the same!
I will close this as it seems to have been resolved. Please let us know if you are experiencing any other issues.
The docker image has the following issues when I run the commands within the container:
Command: R
Command: apt-get update
Environment:
Please advise how to address the above issues.