search

Bioconductor / copy-number-analysis

Explore, compare, and evaluate Bioconductor packages related to genomic copy number analysis
21 stars 12 forks source link

Error in if (WL >= sl[i]) { : missing value where TRUE/FALSE needed #8

Closed deb0612 closed 3 years ago

deb0612 commented 3 years ago

Dear sir, I am using cn.mops in my WES data with hg38 reference sequence(Homo_sapiens_assembly38.fasta). When I use bamDataRanges <- getReadCountsFromBAM(BAMFiles) command.It shows: Error in if (WL >= sl[i]) { : missing value where TRUE/FALSE needed How is that?

lshep commented 3 years ago

Hello @deb0612 You might have more success posting your question on the bioconductor support site . When you post there you will need to provide more information for anyone to be able to help you. Like the structure of BamFiles and your sessionInfo()