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BioinfOMICS / LipidSigR

R package for Analyzing Lipidomic Datasets
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LipidSig installation #13

Open Diann-hw opened 10 months ago

Diann-hw commented 10 months ago

Web-based version keeps disconnecting from server which makes the analysis impossible. I have tried to install R-package, but met with several errors:

Under R 4.3.0, BiocManager version 3.18 was installed with "> BiocManager::install(version = "3.18") " and the "package" 'class', 'cluster' et al were updated.

BiocManager::valid() ## R version 3.5 or later

However, LipidSig installation failed:

BiocManager::install("LipidSigR", version = "devel") Error: Bioconductor version '3.19' requires R version '4.4'; use version = '3.18' with R version 4.3; see https://bioconductor.org/install

Other installations also failed:

devtools::install_github("ropensci/iheatmapr") Error in loadNamespace(x) : there is no package called ‘devtools’ devtools::install_github('TMSWCChenglab/LipidSigR') Error in loadNamespace(x) : there is no package called ‘devtools’

Could you provide more detailed instruction on the installation for users who has little knowledge in R?

Thanks.

Diann-hw commented 10 months ago

It looks I did not install 'devtools'.

install.packages('devtools')

then devtools::install_github("ropensci/iheatmapr") devtools::install_github('TMSWCChenglab/LipidSigR')

no error