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BioinformaticsFMRP / PanCanStem_Web

https://bioinformaticsfmrp.github.io/PanCanStem_Web/
GNU General Public License v3.0
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fnGenes #1

Open ARONGZHI opened 5 years ago

ARONGZHI commented 5 years ago

if(!is.null(fnGenes)){ vGenes <- read.delim( fnGenes, header=FALSE ) %>% as.matrix() %>% drop() VE <- genes2hugo( vGenes, "entrezgene" ) X <- X[intersect( rownames(X), VE[,2] ),] } What fnGenes？

shizhiwen1990 commented 3 years ago

What fnGenes？

arsenij-ust commented 11 months ago

@tiagochst @mwells21 @labrazil What is meant above, is that in the tutorial for mRNAsi in the main.train function the object fnGenes occurs without having been initiated before. Therefore, the above code section throws an error. It would be nice if the code or documentation is adjusted a bit at this point and defines what is meant by fnGenes. Thanks and best regards.