TCGAvisualize_starburst needs updating

BioinformaticsFMRP / TCGAbiolinks

TCGAbiolinks

http://bioconductor.org/packages/devel/bioc/vignettes/TCGAbiolinks/inst/doc/index.html

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TCGAvisualize_starburst needs updating #448

Closed Richies8 closed 2 years ago

Richies8 commented 3 years ago

The code needs to change "entrezgene" to "entrezgene_id ." Please see the error message below:

Error in getBM(attributes = attributes, filters = c("chromosome_name"), : Invalid attribute(s): entrezgene Please use the function 'listAttributes' to get valid attribute names