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BioinformaticsFMRP / TCGAbiolinks

TCGAbiolinks
http://bioconductor.org/packages/devel/bioc/vignettes/TCGAbiolinks/inst/doc/index.html
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Consider survminer for plotting KM estimates of survival curves #53

Closed MarcinKosinski closed 7 years ago

MarcinKosinski commented 7 years ago

Have you considered using survminer CRAN (by @kassambara) package for plotting KM estimates of survival curves? http://www.sthda.com/english/rpkgs/survminer/

surv_example

labrazil commented 7 years ago

Thank you, haven't seen this one before. Looks excellent! I suggest we implement it.

Houtan

Ph: +1 (310) 570-2362

Sent from my Android. Forgive the brevity, the tpyos and the lack of nuance.

On Dec 15, 2016 7:35 AM, "Marcin Kosiński" notifications@github.com wrote:

Have you considered using survminer CRAN https://cran.rstudio.com/web/packages/survminer/index.html (by @kassambara https://github.com/kassambara) package for plotting KM estimates of survival curves? http://www.sthda.com/english/ rpkgs/survminer/

[image: surv_example] https://cloud.githubusercontent.com/assets/6773454/21224216/54c14af6-c2cb-11e6-9187-4f1cb8678528.png

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MarcinKosinski commented 7 years ago

@tiagochst please see my 3 comments to your commit here BioinformaticsFMRP/TCGAbiolinks@d08e49b