BioinformaticsFMRP / TCGAbiolinks

TCGAbiolinks
http://bioconductor.org/packages/devel/bioc/vignettes/TCGAbiolinks/inst/doc/index.html
286 stars 109 forks source link

how do I turn the complex heatmap from TCGAvisualize_oncoprint into a ggplot object that I can download? #554

Open csmatyi opened 1 year ago

csmatyi commented 1 year ago

Hello everyone,

How do I turn the complex heatmap from TCGAvisualize_oncoprint into a ggplot object that I can download? In other words, how do /i change this code:

p <- TCGAvisualize_oncoprint(mut = mutations, genes = mutations$Hugo_Symbol, rm.empty.columns = TRUE)

so that I can download it?

Thanks, csmatyi