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BioinformaticsFMRP / TCGAbiolinks

TCGAbiolinks
http://bioconductor.org/packages/devel/bioc/vignettes/TCGAbiolinks/inst/doc/index.html
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funs() deprecated in newer dplyr versions #563

Open Eomesodermin opened 1 year ago

Eomesodermin commented 1 year ago

following a call to GDCprepare_clinic(query) I got the following warning message.

Warning message: funs() was deprecated in dplyr 0.8.0. ℹ Please use a list of either functions or lambdas:

Simple named list: list(mean = mean, median = median) Auto named with tibble::lst(): tibble::lst(mean, median) Using lambdas list(~ mean(., trim = .2), ~ median(., na.rm = TRUE))

I'm not impacted by this error but just informing the maintainers.

ghost commented 1 year ago

I got this error as well. I see that I have the clinical data downloaded... does this give any issues down the road?

Eomesodermin commented 1 year ago

I got this error as well. I see that I have the clinical data downloaded... does this give any issues down the road?

Not that I'm aware off. My downstream analysis didn't have any noticeable issues.