BioinformaticsFMRP / TCGAbiolinks

TCGAbiolinks
http://bioconductor.org/packages/devel/bioc/vignettes/TCGAbiolinks/inst/doc/index.html
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how to get the DFS(Disease-Free Survival), PFS survival data from TCGA clinical data? #581

Open ZihaoXingUP opened 1 year ago

ZihaoXingUP commented 1 year ago

how to get the DFS(Disease-Free Survival), PFS(Progression-Free Survival) survival data from TCGA clinical data?

tiagochst commented 1 year ago

@ZihaoXingUP I believe some of the information you want might be in supplemental files from DOI: https://doi.org/10.1016/j.cell.2018.02.052

ZihaoXingUP commented 1 year ago

@ZihaoXingUP I believe some of the information you want might be in supplemental files from DOI: https://doi.org/10.1016/j.cell.2018.02.052

thanks, i download the clinical data from cBioPortal which have the OS(Overall Survival), DFS(Disease-Free Survival), PFS(Progression-Free Survival), DSS(Disease-Specific Survial) information, but, i found the surivival p value is so different between TCGAbiolinks OS survival analysis and cBioPortal OS survival analysis.