BioinformaticsFMRP / TCGAbiolinks

TCGAbiolinks
http://bioconductor.org/packages/devel/bioc/vignettes/TCGAbiolinks/inst/doc/index.html
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GEO:Error in `left_join()`: ! Can't join `x$ID` with `y$ID` due to incompatible types. ℹ `x$ID` is a <character>. ℹ `y$ID` is a <integer>. #628

Open zhihuawang2015 opened 6 months ago

zhihuawang2015 commented 6 months ago

dat_result <- dat_exp %>% as.data.frame() %>% tibble::rownames_to_column("ID") %>% left_join(., dat_GPL4133, by = 'ID') %>% aggregate(x = ., by = list(.$'GENE_SYMBOL'), FUN = mean) %>% select(-c('ID','GENE_SYMBOL')) %>% tibble::column_to_rownames('Group.1').when running this code,such a result has emerged:Error in left_join(): ! Can't join x$ID with y$ID due to incompatible types. ℹ x$ID is a . ℹ y$ID is a .what happened?