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BioinformaticsFMRP / TCGAbiolinksGUI

TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/
http://bioinformaticsfmrp.github.io/TCGAbiolinksGUI
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GUI innactivated #30

Open rtorrieri opened 7 years ago

rtorrieri commented 7 years ago

Hello, I have TCGAbiolinks GUI installed on my server, here at FMRP/Ribeirão Preto. When I start the GUI, it appears with a gray layer over the interface, giving the impression of being inactivated. The commands are accessible but the drop down menus does not show anything, so I can not use the package for any analysis. There is a print-screen attached. Any clue on how can I solve this?

Best regards,

Raul Torrieri

captura de tela de 2017-11-06 13-55-35

captura de tela de 2017-11-06 14-08-41

tiagochst commented 7 years ago

Hello,

I had the same problem with an old version of TCGAbiolinks. Do you mind updating it, this should solve the problem?

devtools::install_github("BioinformaticsFMRP/TCGAbiolinks") devtools::install_github("BioinformaticsFMRP/TCGAbiolinksGUI")

If you are using the shiny server you will need to see which is the library path (you can check the paths with .libPaths(), but in linux normally it is "/usr/local/lib/R/site-library/") then you can update using (you might need root access)

devtools::install_github("tiagochst/ELMER",lib = "/usr/local/lib/R/site-library/")

Best regards, Tiago