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MeShClust terminates due to mean1 is zero #27

Open yaohaobin opened 3 weeks ago

yaohaobin commented 3 weeks ago

My input sequences are assembled contigs (1000bp to over 300k). During running MeShClust, the program terminates: Statistician warning at harmonicMeanRSimilarity. A sequence is too short. Similarity is assigned zero. (many such lines) Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: Mean 1 is: 0, mean 2 is: 0.269531

Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: 0, mean 2 is: 0.105957

0, mean 2 is: 0.149414

Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: 0, mean 2 is: 0.223145

Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: 0, mean 2 is: 0.109619

0, mean 2 is: 0.115234

Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: 0, mean 2 is: 0.11377

Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: 0, mean 2 is: 0.196045

Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: 0, mean 2 is: 0.311768

Mean 1 (mean1) and Mean 2 (mean2) cannot be zeros. Mean 1 is: terminate called recursively terminate called recursively terminate called recursively terminate called recursively