BiomedicalMachineLearning / Spacell

MIT License
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ValueError: No such layer: res5a_branch2a #2

Open linwang6 opened 4 years ago

linwang6 commented 4 years ago

Hi, thanks for this cool tool, but when I tried to use it, it gave error, se below:

python spacell_classification.py 2020-07-04 18:00:49.875302: I tensorflow/core/platform/cpu_feature_guard.cc:143] Your CPU supports instructions that this TensorFlow binary was not compiled to use: AVX2 AVX512F FMA 2020-07-04 18:00:50.177694: I tensorflow/compiler/xla/service/service.cc:168] XLA service 0x7f9b90294800 initialized for platform Host (this does not guarantee that XLA will be used). Devices: 2020-07-04 18:00:50.177712: I tensorflow/compiler/xla/service/service.cc:176] StreamExecutor device (0): Host, Default Version Traceback (most recent call last): File "spacell_classification.py", line 263, in run_combine_model() File "spacell_classification.py", line 67, in run_combine_model parallel_modelcombine, model = st_comb_nn((SIZE[0], SIZE[1], N_CHANNEL), (cm_shape,), len(class_list)) File "/Users/LW/miniconda3/lib/python3.6/site-packages/SpaCell/model.py", line 224, in st_comb_nn stage_5_start = resnet_base.get_layer("res5a_branch2a") File "/Users/LW/miniconda3/lib/python3.6/site-packages/tensorflow/python/keras/engine/network.py", line 563, in get_layer raise ValueError('No such layer: ' + name) ValueError: No such layer: res5a_branch2a

Could you tell me how to fix it? Thanks in advance.

linwang6 commented 4 years ago

Hi, could you please help to address this issue? Thanks!