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BiomedicalMachineLearning / stLearn

A novel machine learning pipeline to analyse spatial transcriptomics data
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Interactive stLearn: BokehJS 3.1.1 successfully loaded but no picture seen #269

Closed howtofindme closed 3 months ago

howtofindme commented 6 months ago

Really wonderful job， Thanks!

When I follow your tutuial in https://stlearn.readthedocs.io/en/latest/tutorials/Interactive_plot.html. I did not find the interactive interface in my jupyterlab. Could you give me some suggestion?

image

Best, Young

duypham2108 commented 6 months ago

Currently, it only supports local computer jupyter notebook. So if you are using remote server to run jupyter then it won't work

howtofindme commented 6 months ago

Currently, it only supports local computer jupyter notebook. So if you are using remote server to run jupyter then it won't work

Thanks for your timely reply,

As you suggest ,I have installed jupyter in local. but it throw me another error,could you give some suggestion? image Best, Young

howtofindme commented 6 months ago

Currently, it only supports local computer jupyter notebook. So if you are using remote server to run jupyter then it won't work

Thanks for your timely reply,

As you suggest ,I have installed jupyter in local. but it throw me another error,could you give some suggestion? image Best, Young

even I change the ip location ,it still gives me errors: image image image

duypham2108 commented 6 months ago

Can you run the juputer notebook or lab on the port :8888? I only setting for that default port

howtofindme commented 6 months ago

Can you run the juputer notebook or lab on the port :8888? I only setting for that default port

Yes! You are right. Thanks for your kind reply. I have made it by running the juputer notebook or lab on the port :8888!

Best, Young