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BiomedicalMachineLearning / stLearn

A novel machine learning pipeline to analyse spatial transcriptomics data
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stlearn attributes not found #276

Closed mvereten closed 3 months ago

mvereten commented 5 months ago

Dear team,

I attempted to install the package, and that went well, I have the environment with stlearn package in it. Then I activate the environment and open up Python. I add the package path via sys and the stlearn seems to load ok, although it doesn't refer to an init__.py file, and then I get errors such as 'module 'stlearn' has no attribute 'tl' (same for 'pl'). It may be something to do with the path added, but I don't see what's wrong. Any ideas would be much appreciated. Thanks, M

duypham2108 commented 5 months ago

Can you create a new environment and install by conda? https://stlearn.readthedocs.io/en/latest/installation.html#install-by-anaconda