Import H&E Image for Xenium

BiomedicalMachineLearning / stLearn

A novel machine learning pipeline to analyse spatial transcriptomics data

Other

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Import H&E Image for Xenium #314

Open ChenlingTangMDA opened 4 weeks ago

ChenlingTangMDA commented 4 weeks ago

The imported tissue H&E image don't align with the spatial coordinates in st.pl.cluster_plot. Is there any way to adjust their alignment or import alignment files from Xenium Explorer?