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BioplatformsAustralia / bpaotu

OTU database access for the Australian Microbiome
GNU Affero General Public License v3.0
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Refactor ckanext-bulk and use that instead of copy/pasting into bpaotu/bpaotu/bpaotu/bpaotu_bulk #243

Closed hou098 closed 1 year ago

hou098 commented 1 year ago

The bulk metagenome download needs the functionality of https://github.com/BioplatformsAustralia/ckanext-bulk but without the flask and ckan dependencies. To that end I have forked it at https://github.com/hou098/bpaotu_bulk/tree/bpaotu-main This is just to get me out of trouble for now, as I really hate copy/pasting code.

Ideally it would be good to pull out the ckan and flask dependencies from ckanext-bulk and put them in at some higher level so the underlying core functionality is more widely usable.

hou098 commented 1 year ago

No longer relevant as metagenome data is now handled offline by email request.