classAbbrevation.rda have empty space

[baptischmi]

Selection of classes in package-data 'classAbbrevation.rds' isn't working becasue of empty space, e.g. wader_type

classSelection = c("passerine_type", "wader_type", "swift_type", "large_bird", "unid_bird", "bird_flock", "insect")# , "nonbio", "precipitation"

classAbbreviations$class

classAbbreviations$class [1] "passerine_type" "wader_type " "swift_type " "large_bird" "unid_bird "
[6] "bird_flock" "insect " "nonbio " "precipitation"

classAbbreviations$class %in% classSelection

classAbbreviations$class %in% classSelection [1] TRUE FALSE FALSE TRUE FALSE TRUE FALSE FALSE FALSE

[baptischmi]

In the function savePlotToFile, the option to use the data classAbbreviation has been outcommented. for what reason?

# classSelection for fileName
# =========================================================================
  if (!is.null(classSelection)){
    # classes = paste(classAbbreviations$abbr[match(classSelection, 
    #                                                classAbbreviations$class)], 
    #                  collapse = "")
    fileName = paste(fileName, classSelection, sep = "_")
  } else {
    fileName = paste(fileName, "allClasses", sep = "_")
  }

[baptischmi]

a work around would be the addition of this line: classAbbreviations$class <- trimws(classAbbreviations$class, which = "right")

[BirgenH]

In the function savePlotToFile, the option to use the data classAbbreviation has been outcommented. for what reason?

# classSelection for fileName
# =========================================================================
  if (!is.null(classSelection)){
    # classes = paste(classAbbreviations$abbr[match(classSelection, 
    #                                                classAbbreviations$class)], 
    #                  collapse = "")
    fileName = paste(fileName, classSelection, sep = "_")
  } else {
    fileName = paste(fileName, "allClasses", sep = "_")
  }

You can control this directly with the input parameter 'classSelection' of the savePlotToFile() function, i.e., you can simply pass them as the string you want, and they become part of the plot filename. So if you want abbreviations, you can create the abbreviations in your main script prior to passing them to the 'classSelection' input parameter of the function.

I updated the classAbbreviations.rda file of the package so it doesn't contain any whitespaces anymore. Thanks for catching it!