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BirdVox / birdvoxdetect

A pre-trained deep learning system for detecting bird flight calls in continuous recordings
MIT License
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BVC calls BVD on ill-sized PCEN matrices #18

Closed lostanlen closed 4 years ago

lostanlen commented 4 years ago

version 0.2.0a1 triggered during usability check on BVFN (unit02)

birdvoxdetect: Output directory = /beegfs/vl1019/bvd020a_test
birdvoxdetect: Duration of exported clips = 1.00 seconds.
birdvoxdetect: Processing: /beegfs/vl1019/bvd020a_test/BirdVox-full-night_flac/BirdVox-full-night_flac-audio_unit02.flac
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
9118/9118 [==============================] - 63s 7ms/sample
Traceback (most recent call last):
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/runpy.py", line 193, in _run_module_as_main
    "__main__", mod_spec)
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/runpy.py", line 85, in _run_code
    exec(code, run_globals)
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/site-packages/birdvoxdetect/__main__.py", line 7, in <module>
    main()
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/site-packages/birdvoxdetect/cli.py", line 200, in main
    logger_level=logger_level)
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/site-packages/birdvoxdetect/cli.py", line 89, in run
    logger_level=logger_level)
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/site-packages/birdvoxdetect/core.py", line 431, in process_file
    th_peak_locs))
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/site-packages/birdvoxdetect/core.py", line 430, in <lambda>
    lambda x: classify_species(classifier, chunk_pcen, x, taxonomy),
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/site-packages/birdvoxdetect/core.py", line 674, in classify_species
    birdvoxclassify.predict(pcen_clip, classifier=classifier),
  File "/home/vl1019/miniconda3/envs/bvd02a1/lib/python3.6/site-packages/birdvoxclassify/core.py", line 489, in predict
    pcen.shape[2]
birdvoxclassify.birdvoxclassify_exceptions.BirdVoxClassifyError: Invalid number of frames in input PCEN. Expected 104 but got 0.
srun: error: c41-01: task 0: Exited with exit code 1
srun: Terminating job step 6866449.0