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Bishop-Laboratory / RLPipes

RLPipes: A standardized R-loop-mapping pipeline.
https://anaconda.org/bioconda/rlpipes
MIT License
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FastX takes a very long time to index for read length calc #72

Closed millerh1 closed 2 years ago

millerh1 commented 2 years ago

pyfastx is taking a very long time to index and creating large index files. For determining the read length, this is probably unnecessary and we could write a custom module to handle it.