BjornFJohansson / pydna

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
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Bump coverage from 7.3.0 to 7.3.2 #144

Closed dependabot[bot] closed 1 year ago

dependabot[bot] commented 1 year ago

Bumps coverage from 7.3.0 to 7.3.2.

Changelog

Sourced from coverage's changelog.

Version 7.3.2 — 2023-10-02

  • The coverage lcov command ignored the [report] exclude_lines and [report] exclude_also settings (issue 1684). This is now fixed, thanks Jacqueline Lee <pull 1685_>.

  • Sometimes SQLite will create journal files alongside the coverage.py database files. These are ephemeral, but could be mistakenly included when combining data files. Now they are always ignored, fixing issue 1605_. Thanks to Brad Smith for suggesting fixes and providing detailed debugging.

  • On Python 3.12+, we now disable SQLite writing journal files, which should be a little faster.

  • The new 3.12 soft keyword type is properly bolded in HTML reports.

  • Removed the "fullcoverage" feature used by CPython to measure the coverage of early-imported standard library modules. CPython stopped using it <88054_>_ in 2021, and it stopped working completely in Python 3.13.

.. _issue 1605: nedbat/coveragepy#1605 .. _issue 1684: nedbat/coveragepy#1684 .. _pull 1685: nedbat/coveragepy#1685 .. _88054: python/cpython#88054

.. _changes_7-3-1:

Version 7.3.1 — 2023-09-06

  • The semantics of stars in file patterns has been clarified in the docs. A leading or trailing star matches any number of path components, like a double star would. This is different than the behavior of a star in the middle of a pattern. This discrepancy was identified by Sviatoslav Sydorenko <starbad_>, who provided patient detailed diagnosis <pull 1650_> and graciously agreed to a pragmatic resolution.

  • The API docs were missing from the last version. They are now restored <apidocs_>_.

.. _apidocs: https://coverage.readthedocs.io/en/latest/api_coverage.html .. _starbad: nedbat/coveragepy#1407 .. _pull 1650: nedbat/coveragepy#1650

.. _changes_7-3-0:

Commits
  • a316513 build: fix the pypy wheel arguments
  • 7ec2c62 docs: sample HTML for 7.3.2
  • ffd954f docs: prep for 7.3.2
  • 1ea3907 refactor: don't access frame structs directly
  • 7b8dec9 feat!: remove fullcoverage, it doesn't work in 3.13
  • 1040bce refactor: remove unused interned strings
  • 9ab9e0c fix: 3.12 soft keyword type is bolded in HTML
  • 8624ce9 fix: really turn off SQLite journal files on 3.12+
  • 604aafa chore: make upgrade
  • 7c25ba0 fix: don't combine journal files. #1605
  • Additional commits viewable in compare view


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codecov[bot] commented 1 year ago

Codecov Report

Merging #144 (14a09a8) into dev_bjorn (1465bcf) will not change coverage. The diff coverage is n/a.

Additional details and impacted files [![Impacted file tree graph](https://app.codecov.io/gh/BjornFJohansson/pydna/pull/144/graphs/tree.svg?width=650&height=150&src=pr&token=8gKFpo7HAl&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Bj%C3%B6rn+Johansson)](https://app.codecov.io/gh/BjornFJohansson/pydna/pull/144?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Bj%C3%B6rn+Johansson) ```diff @@ Coverage Diff @@ ## dev_bjorn #144 +/- ## ========================================== Coverage 92.98% 92.98% ========================================== Files 36 36 Lines 3607 3607 Branches 558 558 ========================================== Hits 3354 3354 Misses 217 217 Partials 36 36 ```
dependabot[bot] commented 1 year ago

OK, I won't notify you again about this release, but will get in touch when a new version is available. If you'd rather skip all updates until the next major or minor version, let me know by commenting @dependabot ignore this major version or @dependabot ignore this minor version. You can also ignore all major, minor, or patch releases for a dependency by adding an ignore condition with the desired update_types to your config file.

If you change your mind, just re-open this PR and I'll resolve any conflicts on it.