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BjornFJohansson / pydna

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
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Bump pyparsing from 3.1.1 to 3.1.2 #209

Open dependabot[bot] opened 3 months ago

dependabot[bot] commented 3 months ago

Bumps pyparsing from 3.1.1 to 3.1.2.

Changelog

Sourced from pyparsing's changelog.

Version 3.1.2 - March, 2024

  • Added ieee_float expression to pyparsing.common, which parses float values, plus "NaN", "Inf", "Infinity". PR submitted by Bob Peterson (#538).

  • Updated pep8 synonym wrappers for better type checking compatibility. PR submitted by Ricardo Coccioli (#507).

  • Fixed empty error message bug, PR submitted by InSync (#534). This should return pyparsing's exception messages to a former, more helpful form. If you have code that parses the exception messages returned by pyparsing, this may require some code changes.

  • Added unit tests to test for exception message contents, with enhancement to pyparsing.testing.assertRaisesParseException to accept an expected exception message.

  • Updated example select_parser.py to use PEP8 names and added Groups for better retrieval of parsed values from multiple SELECT clauses.

  • Added example email_address_parser.py, as suggested by John Byrd (#539).

  • Added example directx_x_file_parser.py to parse DirectX template definitions, and generate a Pyparsing parser from a template to parse .x files.

  • Some code refactoring to reduce code nesting, PRs submitted by InSync.

  • All internal string expressions using '%' string interpolation and str.format() converted to f-strings.

Commits
  • 7d4bda2 Prep for 3.1.2 release
  • 9533fcb Add early break when checking warning inside a for loop
  • d252980 Update tox.ini to handle posargs when tox is run
  • a1b7aad Better exception messages for nested expressions; enhance assertRaisesParseEx...
  • 5d48b2d Added directx_x_file_parser.py example (parser + parser generator)
  • e13a03b Blackening (updated black)
  • 26e2180 Blackening
  • 670ba22 Convert legacy string formatting to f-strings; expand on some docstrings and ...
  • c19df25 Add CHANGES note for new ieee_float expression in pyparsing.common
  • 640d75b Accept floating-point NaN and Inf literals (#538)
  • Additional commits viewable in compare view


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codecov[bot] commented 3 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 93.00%. Comparing base (cc80481) to head (2fabb55).

Additional details and impacted files [![Impacted file tree graph](https://app.codecov.io/gh/BjornFJohansson/pydna/pull/209/graphs/tree.svg?width=650&height=150&src=pr&token=8gKFpo7HAl&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Bj%C3%B6rn+Johansson)](https://app.codecov.io/gh/BjornFJohansson/pydna/pull/209?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Bj%C3%B6rn+Johansson) ```diff @@ Coverage Diff @@ ## dev_bjorn #209 +/- ## ========================================== Coverage 93.00% 93.00% ========================================== Files 40 40 Lines 3744 3744 Branches 562 562 ========================================== Hits 3482 3482 Misses 217 217 Partials 45 45 ```