Open dgruano opened 1 month ago
This should probably be removed from the Assembly
class docstring, since you actually use it in assemble_linear
instead (check the assemble_linear docstring). This is probably some remnant of how it used to be before
Absolutely! max_nodes is passed in the assemble methods. It is a parameter that I rarely used and perhaps something that might not be needed once we have manuels new assembly code.
Running:
asm = Assembly((pdonr_plasmid, insert), limit=6, max_nodes=10)
gives me:TypeError: Assembly.__init__() got an unexpected keyword argument 'max_nodes'
Is this intended, or should we be able to passmax_nodes
when instanciating a new Assembly object?