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BlaisProteomics / multiplierz

The Multiplierz Proteomics Library
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Bugs opening .d files #5

Closed michaelmarty closed 6 months ago

michaelmarty commented 1 year ago

Hi Team, I found a few bugs when opening Agilent .d files, mostly related to the bruker.py file. Here are my fixes:

bruker.py

Delete izip from import. Not needed and deprecated in Python 3 apparently. Add parentheses in print on Line 355.

init.py

Line 135 needs to catch other import errors: <except (COMError, IOError, OSError) as err:>

With those two changes, it seems to work fine. Hope that helps. I could try to do a pull request, but I think it's faster for you just to make those few edits.

Thanks, Michael Marty

MaxAlex commented 6 months ago

Problems with .d files should be resolved with the recent update, which rewrote the Agilent data access.