BlishLab / scriabin

Analysis of cell-cell communication at single-cell resolution
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error in sum_ig #13

Closed xuansuyang closed 1 year ago

xuansuyang commented 1 year ago

when I run the sum_ig <- AssembleInteractionGraphs(ifnb, by = "prior", split.by = "stim") | | 0 % ~calculating Using database OmniPath

Generating Interaction Matrix... Correcting for sequencing depth . . . Error: vector memory exhausted (limit reached?) Error during wrapup: vector memory exhausted (limit reached?) Error: no more error handlers available (recursive errors?); invoking 'abort' restart

how can I solve this error? thanks

xuansuyang commented 1 year ago

I have solved it