Normally the pipeline outputs warnings to screen if write permission is denied in the refgenome folder; but when outputting a DAG, this first line breaks the format for the vector file.
Error looks like this:
Error: <stdin>: syntax error in line 1 near 'Write'
print statements should be muted under these conditions (or maybe only output error message when writing is actually needed but can't be performed).
Normally the pipeline outputs warnings to screen if write permission is denied in the refgenome folder; but when outputting a DAG, this first line breaks the format for the vector file.
Error looks like this:
Error: <stdin>: syntax error in line 1 near 'Write'print statements should be muted under these conditions (or maybe only output error message when writing is actually needed but can't be performed).