Closed bnavigator closed 4 months ago
In line with https://github.com/Blosc/python-blosc/issues/325#issuecomment-2074321136
Ok. It looks like a new release is needed soon. Thanks for the hint.
We need an update for the soon to be released numpy 2 as well, or have to pin to numpy < 2:
[ 23s] + python3.10 -m blosc.test [ 23s] /usr/lib64/python3.10/runpy.py:126: RuntimeWarning: 'blosc.test' found in sys.modules after import of package 'blosc', but prior to execution of 'blosc.test'; this may result in unpredictable behaviour [ 23s] warn(RuntimeWarning(msg)) [ 23s] test_all_compressors (__main__.TestCodec) ... ok [ 23s] test_all_filters (__main__.TestCodec) ... ok [ 23s] test_basic_codec (__main__.TestCodec) ... ok [ 23s] test_bithuffle_leftovers (__main__.TestCodec) ... ok [ 23s] test_bitshuffle_not_multiple (__main__.TestCodec) ... ok [ 23s] test_cbuffer_validate (__main__.TestCodec) ... ok [ 23s] test_cbuffer_validate_failures (__main__.TestCodec) ... ok [ 23s] test_compress_exceptions (__main__.TestCodec) ... ok [ 23s] test_compress_input_types (__main__.TestCodec) ... ok [ 23s] test_compress_ptr_exceptions (__main__.TestCodec) ... ok [ 23s] test_decompress_exceptions (__main__.TestCodec) ... ok [ 23s] test_decompress_input_types (__main__.TestCodec) ... ok [ 23s] test_decompress_input_types_as_bytearray (__main__.TestCodec) ... ok [ 23s] test_decompress_ptr_exceptions (__main__.TestCodec) ... ok [ 23s] test_decompress_ptr_input_types (__main__.TestCodec) ... ok [ 23s] test_decompress_releasegil (__main__.TestCodec) ... ok [ 23s] test_get_blocksize (__main__.TestCodec) ... ok [ 23s] test_get_cbuffer_sizes (__main__.TestCodec) ... ok [ 23s] test_get_clib (__main__.TestCodec) ... ok [ 26s] test_no_leaks (__main__.TestCodec) ... ok [ 26s] test_pack_array_exceptions (__main__.TestCodec) ... ok [ 26s] test_set_nthreads_exceptions (__main__.TestCodec) ... ok [ 26s] test_unpack_array_exceptions (__main__.TestCodec) ... ok [ 26s] test_unpack_array_with_from_py27_exceptions (__main__.TestCodec) ... ok [ 26s] test_unpack_array_with_unicode_characters (__main__.TestCodec) ... ok [ 26s] test_unpack_array_with_unicode_characters_from_py27 (__main__.TestCodec) ... ok [ 26s] cbuffer_validate (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.cbuffer_validate ... ok [ 26s] compress (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.compress ... ok [ 26s] compress_ptr (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.compress_ptr ... FAIL [ 26s] decompress (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.decompress ... ok [ 26s] decompress_ptr (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.decompress_ptr ... FAIL [ 26s] free_resources (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.free_resources ... ok [ 26s] get_blocksize (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.get_blocksize ... ok [ 26s] get_cbuffer_sizes (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.get_cbuffer_sizes ... ok [ 26s] pack_array (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.pack_array ... ok [ 26s] set_blocksize (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.set_blocksize ... ok [ 26s] set_nthreads (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.set_nthreads ... ok [ 26s] set_releasegil (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.set_releasegil ... ok [ 26s] unpack_array (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.unpack_array ... FAIL [ 26s] [ 26s] ====================================================================== [ 26s] FAIL: compress_ptr (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.compress_ptr [ 26s] ---------------------------------------------------------------------- [ 26s] Traceback (most recent call last): [ 26s] File "/usr/lib64/python3.10/doctest.py", line 2221, in runTest [ 26s] raise self.failureException(self.format_failure(new.getvalue())) [ 26s] AssertionError: Failed doctest test for blosc.toplevel.compress_ptr [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/toplevel.py", line 455, in compress_ptr [ 26s] [ 26s] ---------------------------------------------------------------------- [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/toplevel.py", line 516, in blosc.toplevel.compress_ptr [ 26s] Failed example: [ 26s] (np_array == np_ans).all() [ 26s] Expected: [ 26s] True [ 26s] Got: [ 26s] np.True_ [ 26s] [ 26s] [ 26s] ====================================================================== [ 26s] FAIL: decompress_ptr (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.decompress_ptr [ 26s] ---------------------------------------------------------------------- [ 26s] Traceback (most recent call last): [ 26s] File "/usr/lib64/python3.10/doctest.py", line 2221, in runTest [ 26s] raise self.failureException(self.format_failure(new.getvalue())) [ 26s] AssertionError: Failed doctest test for blosc.toplevel.decompress_ptr [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/toplevel.py", line 597, in decompress_ptr [ 26s] [ 26s] ---------------------------------------------------------------------- [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/toplevel.py", line 642, in blosc.toplevel.decompress_ptr [ 26s] Failed example: [ 26s] (np_array == np_ans).all() [ 26s] Expected: [ 26s] True [ 26s] Got: [ 26s] np.True_ [ 26s] [ 26s] [ 26s] ====================================================================== [ 26s] FAIL: unpack_array (blosc.toplevel) [ 26s] Doctest: blosc.toplevel.unpack_array [ 26s] ---------------------------------------------------------------------- [ 26s] Traceback (most recent call last): [ 26s] File "/usr/lib64/python3.10/doctest.py", line 2221, in runTest [ 26s] raise self.failureException(self.format_failure(new.getvalue())) [ 26s] AssertionError: Failed doctest test for blosc.toplevel.unpack_array [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/toplevel.py", line 739, in unpack_array [ 26s] [ 26s] ---------------------------------------------------------------------- [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/toplevel.py", line 772, in blosc.toplevel.unpack_array [ 26s] Failed example: [ 26s] numpy.alltrue(a == a2) [ 26s] Exception raised: [ 26s] Traceback (most recent call last): [ 26s] File "/usr/lib64/python3.10/doctest.py", line 1350, in __run [ 26s] exec(compile(example.source, filename, "single", [ 26s] File "<doctest blosc.toplevel.unpack_array[5]>", line 1, in <module> [ 26s] numpy.alltrue(a == a2) [ 26s] File "/usr/lib64/python3.10/site-packages/numpy/__init__.py", line 410, in __getattr__ [ 26s] raise AttributeError("module {!r} has no attribute " [ 26s] AttributeError: module 'numpy' has no attribute 'alltrue' [ 26s] ---------------------------------------------------------------------- [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/toplevel.py", line 777, in blosc.toplevel.unpack_array [ 26s] Failed example: [ 26s] numpy.alltrue(a == a2) [ 26s] Exception raised: [ 26s] Traceback (most recent call last): [ 26s] File "/usr/lib64/python3.10/doctest.py", line 1350, in __run [ 26s] exec(compile(example.source, filename, "single", [ 26s] File "<doctest blosc.toplevel.unpack_array[9]>", line 1, in <module> [ 26s] numpy.alltrue(a == a2) [ 26s] File "/usr/lib64/python3.10/site-packages/numpy/__init__.py", line 410, in __getattr__ [ 26s] raise AttributeError("module {!r} has no attribute " [ 26s] AttributeError: module 'numpy' has no attribute 'alltrue' [ 26s] [ 26s] [ 26s] ---------------------------------------------------------------------- [ 26s] Ran 39 tests in 2.636s [ 26s] [ 26s] FAILED (failures=3) [ 26s] Traceback (most recent call last): [ 26s] File "/usr/lib64/python3.10/runpy.py", line 196, in _run_module_as_main [ 26s] return _run_code(code, main_globals, None, [ 26s] File "/usr/lib64/python3.10/runpy.py", line 86, in _run_code [ 26s] exec(code, run_globals) [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/test.py", line 369, in <module> [ 26s] run() [ 26s] File "/home/abuild/rpmbuild/BUILD/blosc-1.11.1/blosc/test.py", line 364, in run [ 26s] assert unittest.TextTestRunner(verbosity=verbosity).\ [ 26s] AssertionError [ 26s] -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-= [ 26s] python-blosc version: 1.11.1 [ 26s] Blosc version: 1.21.5 ($Date:: 2023-05-16 #$) [ 26s] Compressors available: ['blosclz', 'lz4', 'lz4hc', 'snappy', 'zlib', 'zstd'] [ 26s] Compressor library versions: [ 26s] BloscLZ: 2.5.1 [ 26s] LZ4: 1.9.4 [ 26s] Snappy: unknown [ 26s] Zlib: 1.3.1 [ 26s] Zstd: 1.5.5 [ 26s] Python version: 3.10.14 (main, Mar 21 2024, 16:45:28) [GCC] [ 26s] Platform: Linux-6.8.7-1-default-x86_64 (#1 SMP PREEMPT_DYNAMIC Thu Apr 18 07:12:38 UTC 2024 (5c0cf23)) [ 26s] Processor: x86_64 [ 26s] Byte-ordering: little [ 26s] Detected cores: 4 [ 26s] Number of threads to use by default: 4 [ 26s] -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
In line with https://github.com/Blosc/python-blosc/issues/325#issuecomment-2074321136
We need an update for the soon to be released numpy 2 as well, or have to pin to numpy < 2: