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Blue-Matter
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salmonMSE
Salmonid management strategy evaluation
https://docs.salmonmse.com/
GNU General Public License v3.0
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Update PNI75 to PNI50, PNI80
#38
quang-huynh
closed
1 week ago
1
Add handling limit
#37
quang-huynh
opened
1 week ago
0
Report Njuv to SMSE object
#36
quang-huynh
closed
2 weeks ago
0
Create SHist object
#35
quang-huynh
closed
2 weeks ago
0
Add pmax_esc
#34
quang-huynh
closed
1 week ago
0
Report hatchery setting in markdown report
#33
quang-huynh
opened
2 weeks ago
0
Re-do marking for selective broodtake
#32
quang-huynh
closed
1 week ago
2
Create ice cream figure for other metrics
#31
quang-huynh
closed
2 weeks ago
0
Create option ptarget_NOB equal to pNOS (non-selective)
#30
quang-huynh
closed
1 week ago
0
Report pNOB
#29
quang-huynh
closed
2 weeks ago
1
Add likelihood for observed pHOS
#28
quang-huynh
opened
1 month ago
0
Add compare function to plot figures from multiple OM simulations
#27
quang-huynh
opened
1 month ago
1
Conditioning model should require HOB/NOB as data inputs
#26
quang-huynh
opened
1 month ago
0
Create SMSE slots for pNOB and pHOS, etc.
#25
quang-huynh
closed
1 month ago
0
Set zbar_start by age x sim
#24
quang-huynh
closed
1 month ago
0
Incorporate PBT into estimation model for conditioning
#23
quang-huynh
opened
1 month ago
0
Multi-stock modeling
#22
quang-huynh
opened
1 month ago
1
Rename fry state variable to egg
#21
quang-huynh
closed
1 month ago
0
Rename Mocean to Mjuv
#20
quang-huynh
closed
1 month ago
0
Initialize zbar with historical conditioning
#19
quang-huynh
closed
1 month ago
0
Explicit justification of equations weighted by age-class fecundity
#18
quang-huynh
closed
3 months ago
0
Add fitness loss for hatchery origin fish
#17
quang-huynh
closed
3 months ago
0
Add density-dependence of sub-yearling releases with natural juveniles
#16
quang-huynh
closed
3 months ago
0
Update M_loss as a cohort effect
#15
quang-huynh
closed
3 months ago
0
Update PNI, zbar, p_wild for mixed brood year returns
#14
quang-huynh
closed
3 months ago
0
Update F dynamics
#13
quang-huynh
closed
3 months ago
0
Generalize the fleet structure
#12
quang-huynh
opened
6 months ago
1
Separate p_female and SAR between NOS and HOS
#11
quang-huynh
opened
6 months ago
0
Append description of openMSE implementation to dynamics equations article
#10
quang-huynh
closed
3 months ago
1
Add broodtake to age structure figure
#9
quang-huynh
closed
6 months ago
0
Add mark selective fishery
#8
quang-huynh
closed
6 months ago
1
Ensure weir_removal is modeled (separately from p_hatchery)
#7
quang-huynh
closed
6 months ago
1
Model en-route mortality e.g fish passage survival
#6
quang-huynh
closed
1 month ago
0
Calculate PNI from pHOS_effective, not pHOS
#5
quang-huynh
closed
7 months ago
0
Run multiMSE for proyears + 1
#4
quang-huynh
opened
7 months ago
0
MICE rel doesn't work for 1st simulation
#3
quang-huynh
closed
7 months ago
1
Add glossary
#2
quang-huynh
closed
6 months ago
2
Code up AHA and try to convert it to an openMSE model
#1
quang-huynh
closed
6 months ago
1