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BlueBrain
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BluePyEfe
BluePyEfe: Blue Brain Python E-feature extraction
https://bluepyefe.readthedocs.io/en/latest/
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Fixed error bar plot and add holding current to the recording plots
#147
DrTaDa
closed
1 year ago
2
remove spaced from units in igor_reader
#146
DrTaDa
closed
1 year ago
0
Use record auto_threshold when it is actually used
#145
DrTaDa
closed
1 year ago
1
Only compute auto_threshold if no threshold is provided
#144
DrTaDa
closed
1 year ago
0
Refactor nwb reader
#143
DrTaDa
closed
1 year ago
5
Add multi_stim_start and multi_stim_end to the efel_settings when
#142
DrTaDa
closed
1 year ago
1
adding spontaneous in ecode init
#141
darshanmandge
closed
1 year ago
1
Good to add more strict tests?
#140
arnaudon
closed
1 year ago
1
Fix smoothing for current amplitude detection
#139
arnaudon
closed
1 year ago
18
Save all feat values
#138
arnaudon
closed
1 year ago
0
Also pickles the targets/protocols
#137
DrTaDa
closed
1 year ago
1
first rough try to get better CI
#136
arnaudon
closed
1 year ago
4
Update README.md: fix broken link to ipynb
#135
anilbey
closed
1 year ago
0
Fix annyoing numpy warning
#134
arnaudon
closed
1 year ago
0
Add linting/black
#133
arnaudon
closed
1 year ago
6
add parallel plotting
#132
arnaudon
closed
1 year ago
4
Recording: extract set_autothreshold as a method
#131
anilbey
closed
1 year ago
0
recording::compute_spikecount: peak_time is not computed with the final auto_threshold value
#130
anilbey
closed
1 year ago
4
Fix step detection
#129
AurelienJaquier
closed
1 year ago
0
Use maintained igor2 instead of unmaintained igor
#128
AurelienJaquier
closed
1 year ago
2
Display the auto-threshold when plotting a recording
#127
DrTaDa
closed
1 year ago
1
Fix sahp step detection
#126
DrTaDa
closed
1 year ago
0
Add stimulus representation in ecode docstrings
#125
AurelienJaquier
closed
1 year ago
0
Add step detection to sAHP
#124
DrTaDa
closed
1 year ago
0
Add python 3.11 tests to github workflow
#123
AurelienJaquier
closed
1 year ago
1
Improve step detection
#122
DrTaDa
closed
1 year ago
0
Improve the ticks markign the spikes in the plotting of the recordings
#121
DrTaDa
closed
1 year ago
0
Attempt at fixing auto-threshold
#120
DrTaDa
closed
1 year ago
1
force numpy<1.24 until igor is updated
#119
AurelienJaquier
closed
1 year ago
0
Add default std values to current extraction
#118
DrTaDa
closed
1 year ago
0
Explicit the value used as a default for the standard deviation
#117
DrTaDa
closed
1 year ago
1
Fix 'keep alive' workflow and tox4 fix
#116
AurelienJaquier
closed
1 year ago
2
Minor bug
#115
DrTaDa
closed
1 year ago
3
Adds the ability to extract for absolute amplitude in addition to
#114
DrTaDa
closed
1 year ago
0
enable syntax check in tox by default
#113
anilbey
closed
1 year ago
0
Deprecate Python 3.6
#112
anilbey
closed
1 year ago
0
Separate testing from building in github actions
#111
AurelienJaquier
closed
1 year ago
1
FIX #94, compute and show coverage
#110
anilbey
closed
1 year ago
2
Dummy commit to push bluepyefe2 to pypi
#109
wvangeit
closed
2 years ago
0
Add Changelog.rst
#108
anilbey
closed
2 years ago
1
in example notebook feature results differ when they are computed two times in a row
#107
anilbey
closed
2 years ago
2
Check voltage
#106
DrTaDa
closed
1 year ago
1
Create the directory for the output cells.pkl if it does not exist
#105
DrTaDa
closed
2 years ago
0
Some update to the README and docstrings
#104
DrTaDa
closed
2 years ago
0
Fix
#103
DrTaDa
closed
2 years ago
0
Ad doc to BPE2
#102
DrTaDa
opened
2 years ago
1
Rework the eCode classes to remove duplicate code
#101
DrTaDa
closed
2 years ago
0
Update the docstrings
#100
DrTaDa
closed
2 years ago
1
Update the docstrings
#99
DrTaDa
closed
2 years ago
2
BPE2: build and publish documentation
#98
anilbey
opened
2 years ago
9
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