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BlueBrain / BluePyMM

Blue Brain Python Cell Model Management
https://bluepymm.readthedocs.io/en/latest/
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allow for non-complete emodels #207

Open arnaudon opened 3 years ago

arnaudon commented 3 years ago

If there are some missing emodels for some etypes, this is crashing:

https://github.com/BlueBrain/BluePyMM/blob/master/bluepymm/prepare_combos/create_mm_sqlite.py#L365

Maybe we could add an option from config to allow for non-complete emodels, and do: morph_fullmtype_etype_map = morph_fullmtype_etype_map.dropna() before the check.

wvangeit commented 3 years ago

Yes, this was by design. If there is a use case, we could an option with a list of e-types that should be ignored.