codecov-commenter
commented
1 year ago Codecov Report
Merging #450 (7f8df7d) into master (5e4b75e) will decrease coverage by
0.40%. The diff coverage is82.75%.
@@ Coverage Diff @@
## master #450 +/- ##
==========================================
- Coverage 87.87% 87.47% -0.40%
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Files 50 50
Lines 4288 4312 +24
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+ Hits 3768 3772 +4
- Misses 520 540 +20 | Impacted Files | Coverage Δ | |
|---|---|---|
| bluepyopt/deapext/CMA_SO.py | 95.65% <ø> (ø) |
|
| bluepyopt/deapext/optimisationsCMA.py | 81.75% <0.00%> (ø) |
|
| bluepyopt/deapext/stoppingCriteria.py | 81.75% <84.61%> (-12.60%) |
:arrow_down: |
| bluepyopt/deapext/CMA_MO.py | 83.63% <100.00%> (ø) |
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AurelienJaquier
DrTaDa
For reference, here is a description of the new stopping criterion: The problem we had with the previous stopping criterion I proposed was that, due to noise in the optimisation best fitness curve, it sometimes triggered too soon. This is why I decided to combine the same stopping criterion, stop if the median of the last 20 values of the best fitness has improved less than 1% over the last 100 generations, with another one, stop if the standard deviation of the best fitness across the last 20 generations is below a threshold of 2% of the best fitness. This prevents the first criterion to trigger due to noise, since the noise will prevent the second criterion to trigger. Combining these two criteria will greatly decrease the number of false positive.