Week 2 tutorial: Integrate Neuroscience Datasets from Multiple Sources using MINDS

[PhaedraKS]

Hello, I just had this same issue but with another part of the tutorial. I hope this issue can be fixed in a similar way.

Tutorial: Integrate Neuroscience Datasets from Multiple Sources using MINDS Configure a forge client to store, manage and access datasets error: /srv/conda/envs/notebook/lib/python3.7/site-packages/rdflib_jsonld/init.py:12: DeprecationWarning: The rdflib-jsonld package has been integrated into rdflib as of rdflib==6.0.1. Please remove rdflib-jsonld from your project's dependencies. DeprecationWarning,

Thank you for any help and your time, Phaedra

[jdcourcol]

@MFSY I am assigning that to you as it is week 2.

[MFSY]

It should be fixed now. @PhaedraKS please try again and let us know if any error subsist.

[PhaedraKS]

The error is fixed, thank you. I also have a different error now

dataset_from_different_sources select metadata

KeyError Traceback (most recent call last) /tmp/ipykernel_61/1646912356.py in 32 __typename\n }\n}\n""" 33 }) ---> 34 nm_mouselight_graphql = json.loads(nm_request.text)["data"]["searchNeurons"]["neurons"] 35 nm_mouselight_names = [x["idString"] for x in nm_mouselight_graphql]

KeyError: 'data'

[MFSY]

Hi @PhaedraKS ,

Mouselight changed their API => hence the error. The error should be fixed now.

[MFSY]

Closing this issue. Fixed as mentioned in #97