BlueBrain / morphoclass

Neuronal morphology preparation and classification using Machine Learning.
https://morphoclass.readthedocs.io
Apache License 2.0
8 stars 4 forks source link

Clean up `mcar-luigi.cfg` configuration for `MCAR` curation workflow #71

Closed FrancescoCasalegno closed 2 years ago

FrancescoCasalegno commented 2 years ago
FrancescoCasalegno commented 2 years ago

Which stages are executed by MCAR curation?

  1. Align
  2. CheckNeurites
  3. Collect
  4. Curate -- the main stage we want to execute
  5. DetectErrors
  6. EnsureNeuritesOutsideSoma
  7. ErrorsReport
  8. ExtractMarkers
  9. Orient
  10. PlotErrors
  11. PlotMarkers
  12. PlotMorphologies
  13. Recenter
  14. Resample
  15. Sanitize