simuPOP conda installation

BoPeng / simuPOP

A general-purpose forward-time population genetics simulation environment.

http://bopeng.github.io/simuPOP/

GNU General Public License v2.0

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simuPOP conda installation #56

Closed EricFriedlander closed 6 years ago

EricFriedlander commented 6 years ago

Hi,

I just installed simuPOP using the instructions on your website. The installation seems to have gone fine except that it doesn't seem to have installed the plotter module. Do you know why this could be or how to solve this issue?

Best,

Eric

BoPeng commented 6 years ago

Hi, Eric,

The plotter module has been deprecated due to difficulties in maintaining rpy connections and working with matplotlib. In general you are recommended to output data to files and plot them by yourself (PyOutput, PyEval etc). If you really like what the plotter module offers, you can try to adapt it from the source code , which should work with only minor syntax changes.

EricFriedlander commented 6 years ago

Gotcha. Thanks for the quick response!