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BodenmillerGroup / ImcSegmentationPipeline

A pixel classification based multiplexed image segmentation pipeline
https://bodenmillergroup.github.io/ImcSegmentationPipeline/
MIT License
83 stars 35 forks source link

Error while running IMCtools #74

Closed raman91 closed 3 years ago

raman91 commented 3 years ago

Hi,

When i run IMCtools convertor script - mcdfolder2imcfolder.py, i get an error message:

Error reading MCD acquisition: 1

How can I solve this issue?

Thanks

nilseling commented 3 years ago

Duplicated issue here