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BodenmillerGroup / cytomapper

R package for visualization of highly multiplexed imaging data
https://bodenmillergroup.github.io/cytomapper/
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legend with many elements is not fully visible #26

Closed toobiwankenobi closed 4 years ago

toobiwankenobi commented 4 years ago

legend entries are cut off when there are too many unique elements (see image). there is maybe a way to illustrate all unique elements in multiple columns instead of just one.

000002

nilseling commented 4 years ago

I would recommend subsetting the SingleCellExperiment to the information (e.g. cell-type) that you want to visualize. This will also subset the legend and give you a clearer colouring. Just to document the approach here ;)