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BodenmillerGroup / cytomapper

R package for visualization of highly multiplexed imaging data
https://bodenmillergroup.github.io/cytomapper/
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mcols to colData #62

Closed ellispatrick closed 2 years ago

ellispatrick commented 2 years ago

It would be fantastic if measureObjects expanded the information in mcols of the masks/images into the colData of the resulting SingleCellExperiment/SpatialExperiment.

nilseling commented 2 years ago

That's a good point, thanks! I'll add it soon.

nilseling commented 2 years ago

This is now added in v1.9.1 via #63. Please reopen if you're experiencing problems.