BoevaLab / CanSig

Discovering de novo shared transcriptional programs in single cancer cells

https://boevalab.github.io/CanSig/

BSD 3-Clause "New" or "Revised" License

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Closed josephineyates closed 2 years ago

josephineyates commented 2 years ago

Since our pipeline's ultimate goal is to discover de novo signatures that are meaningful, we want to save the signatures found in each folder

pawel-czyz commented 2 years ago

How is it different from #16 ?

josephineyates commented 2 years ago

16 saves the results of GSEA, this saves the results of the differential gene expression, meaning here we only save for every cluster the list of differentially expressed genes with associated p value, while for the GSEA results we save the enrichment pathways found