Annotation of segments - Githubissues

BoevaLab / FREEC

Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data

152 stars 49 forks source link

Annotation of segments #75

Open kumara3 opened 4 years ago

kumara3 commented 4 years ago

Hello,

Thank you for the great tool. I ran control free and got the regions with cnv status. My question is Does control freec provide any script for annotating the segments with called CNV to gene name ?

Regards, Ashwani

valeu commented 4 years ago

Dear Ashwani, no, it does not. But if you write it, please do not hesitate to contribute ;-)