Sequencing type bug - Githubissues

Bohdan-Khomtchouk / Biochat

Natural language processing of Gene Expression Omnibus data

http://www.biochat.ai

MIT License

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Sequencing type bug #4

Closed Bohdan-Khomtchouk closed 6 years ago

Bohdan-Khomtchouk commented 6 years ago

Going to https://www.ncbi.nlm.nih.gov/sites/GDSbrowser?acc=GDS651 and clicking on the hyperlinked GPL570 leads to a page that says: "Technology type: in situ oligonucleotide" which should be coded as microarray. Currently, GDS651 returns Sequencing type: other, whereas it should be microarray.

vseloved commented 6 years ago

It seems that all GDS's are microarray, so this will be hardcoded