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BohndiekLab / patato

PATATO: A Python PhotoAcoustic Tomography Analysis Toolkit
MIT License
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Error in converting Ithera Scan Data to hdf5 data #46

Open anirbanchakraborty96 opened 10 months ago

anirbanchakraborty96 commented 10 months ago

Hi! I am trying to convert the raw scan data containing the msot,bir,irf etc files to hdf5 file format using your command below:

patato-import-ithera /path/to/itherastudyfolder /path/to/processeddatafolder

But the result says No Scan is found within the folders. I am using windows 11 and anaconda with separate patato environment.

tomelse commented 7 months ago

@anirbanchakraborty96 Did you manage to get everything working with PATATO? I will close the issue if so. Thanks :)