BorgwardtLab / proteinshake

Protein structure datasets for machine learning.
https://proteinshake.ai
BSD 3-Clause "New" or "Revised" License
99 stars 8 forks source link

Task splits based on sequence clusters #156

Closed timkucera closed 1 year ago

codecov[bot] commented 1 year ago

Codecov Report

Base: 53.67% // Head: 55.25% // Increases project coverage by +1.57% :tada:

Coverage data is based on head (51ff99c) compared to base (aacd54d). Patch coverage: 86.72% of modified lines in pull request are covered.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #156 +/- ## ========================================== + Coverage 53.67% 55.25% +1.57% ========================================== Files 40 40 Lines 1427 1417 -10 ========================================== + Hits 766 783 +17 + Misses 661 634 -27 ``` | Flag | Coverage Δ | | |---|---|---| | pytest | `55.25% <86.72%> (+1.57%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#carryforward-flags-in-the-pull-request-comment) to find out more. | [Impacted Files](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab) | Coverage Δ | | |---|---|---| | [proteinshake/datasets/dataset.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL2RhdGFzZXRzL2RhdGFzZXQucHk=) | `33.33% <ø> (ø)` | | | [proteinshake/utils/\_\_init\_\_.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3V0aWxzL19faW5pdF9fLnB5) | `100.00% <ø> (ø)` | | | [proteinshake/utils/io.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3V0aWxzL2lvLnB5) | `55.65% <56.25%> (+6.89%)` | :arrow_up: | | [proteinshake/tasks/tm\_task.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3Rhc2tzL3RtX3Rhc2sucHk=) | `87.50% <88.23%> (+10.83%)` | :arrow_up: | | [proteinshake/tasks/task.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3Rhc2tzL3Rhc2sucHk=) | `76.27% <91.66%> (+3.46%)` | :arrow_up: | | [proteinshake/tasks/binding\_site\_task.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3Rhc2tzL2JpbmRpbmdfc2l0ZV90YXNrLnB5) | `85.71% <100.00%> (+19.04%)` | :arrow_up: | | [proteinshake/tasks/ec\_task.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3Rhc2tzL2VjX3Rhc2sucHk=) | `83.33% <100.00%> (+6.41%)` | :arrow_up: | | [proteinshake/tasks/ligand\_affinity\_task.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3Rhc2tzL2xpZ2FuZF9hZmZpbml0eV90YXNrLnB5) | `85.71% <100.00%> (+10.71%)` | :arrow_up: | | [proteinshake/tasks/scop\_task.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3Rhc2tzL3Njb3BfdGFzay5weQ==) | `83.33% <100.00%> (+6.41%)` | :arrow_up: | | ... and [5 more](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/156?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab) | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab)

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