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BorgwardtLab / proteinshake

Protein structure datasets for machine learning.
https://proteinshake.ai
BSD 3-Clause "New" or "Revised" License
99 stars 8 forks source link

Process test #193

Closed cgoliver closed 1 year ago

cgoliver commented 1 year ago
codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 80.95% and project coverage change: +21.83 :tada:

Comparison is base (ca057e4) 61.51% compared to head (de21b15) 83.34%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #193 +/- ## =========================================== + Coverage 61.51% 83.34% +21.83% =========================================== Files 45 43 -2 Lines 1559 1555 -4 =========================================== + Hits 959 1296 +337 + Misses 600 259 -341 ``` | Flag | Coverage Δ | | |---|---|---| | pytest | `83.34% <80.95%> (+21.83%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#carryforward-flags-in-the-pull-request-comment) to find out more. | [Impacted Files](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab) | Coverage Δ | | |---|---|---| | [proteinshake/datasets/dataset.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL2RhdGFzZXRzL2RhdGFzZXQucHk=) | `86.48% <ø> (+39.45%)` | :arrow_up: | | [proteinshake/datasets/protein\_family.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL2RhdGFzZXRzL3Byb3RlaW5fZmFtaWx5LnB5) | `76.19% <ø> (+38.09%)` | :arrow_up: | | [proteinshake/utils/\_\_init\_\_.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3V0aWxzL19faW5pdF9fLnB5) | `100.00% <ø> (ø)` | | | [proteinshake/datasets/protein\_ligand\_decoys.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL2RhdGFzZXRzL3Byb3RlaW5fbGlnYW5kX2RlY295cy5weQ==) | `78.04% <12.50%> (+36.58%)` | :arrow_up: | | [proteinshake/datasets/gene\_ontology.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL2RhdGFzZXRzL2dlbmVfb250b2xvZ3kucHk=) | `66.66% <50.00%> (+30.76%)` | :arrow_up: | | [proteinshake/utils/io.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3V0aWxzL2lvLnB5) | `68.38% <58.33%> (+12.99%)` | :arrow_up: | | [proteinshake/datasets/protein\_ligand\_interface.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL2RhdGFzZXRzL3Byb3RlaW5fbGlnYW5kX2ludGVyZmFjZS5weQ==) | `87.80% <86.66%> (+52.21%)` | :arrow_up: | | [proteinshake/datasets/protein\_protein\_interface.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL2RhdGFzZXRzL3Byb3RlaW5fcHJvdGVpbl9pbnRlcmZhY2UucHk=) | `80.39% <89.28%> (+30.39%)` | :arrow_up: | | [proteinshake/datasets/scop.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL2RhdGFzZXRzL3Njb3AucHk=) | `62.96% <100.00%> (+27.47%)` | :arrow_up: | | [proteinshake/transforms/coords.py](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab#diff-cHJvdGVpbnNoYWtlL3RyYW5zZm9ybXMvY29vcmRzLnB5) | `100.00% <100.00%> (+72.22%)` | :arrow_up: | ... and [6 files with indirect coverage changes](https://codecov.io/gh/BorgwardtLab/proteinshake/pull/193/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab) Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=BorgwardtLab)

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