BosingerLab / BALDR

MIT License
7 stars 8 forks source link

STAR genome index generation Killed during Docker install #16

Open moduff opened 2 years ago

moduff commented 2 years ago

Attempting to follow install instructions from the github page, things are fine until:

[root@2f4cb214883c STAR_GRCh38]# STAR --runThreadN 4 --runMode genomeGenerate --genomeDir STAR_GRCh38_index --genomeFastaFiles Homo_sapiens.GRCh38.dna.primary_assembly.fa --sjdbGTFfile Homo_sapiens.GRCh38.86.gtf --sjdbOverhang 100 Feb 11 02:32:07 ..... started STAR run Feb 11 02:32:07 ... starting to generate Genome files Killed

The iMac I'm running on has 64GB of memory. I'm missing something?