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BouchardLab / nsds_lab_to_nwb

Python package to convert NSDS Lab data to NWB files.
https://nsds-lab-to-nwb.readthedocs.io/en/latest/
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Incorrect number of trials for RVG16_B01 #114

Closed jthermiz closed 2 years ago

jthermiz commented 3 years ago

There are only 118 trials list for /clusterfs/NSDS_data/nwb/test/RVG16/RVG16_B01.nwb but there should be 120 (60 for stimulus and 60 for baseline).

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JesseLivezey commented 2 years ago

Another stim parsing problem for a tone150 block:

ValueError: ToneTokenizer: Incorrect number of stimulus onsets found in block RVG06_B06. Expected 4500, found 4496.

jihyunbak commented 2 years ago

We were missing the first mark in wn2 blocks - this can be fixed if a lower threshold was used (0.1 instead of 0.3), as implemented in PR #130. We had the same observation before (for example #102), but we understand a little better now: the first mark is smaller than all the other markers in the recorded mark time series.

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This is probably because the mark for wn2 starts right at the beginning of the audio file (although not sure exactly why)...

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