BouchardLab / nsds_lab_to_nwb

Python package to convert NSDS Lab data to NWB files.

https://nsds-lab-to-nwb.readthedocs.io/en/latest/

0 stars 4 forks source link

Removed metadata yaml write dependency #135

Closed jthermiz closed 2 years ago

jthermiz commented 2 years ago

Description and related issues

Changes metadata reading behavior to always read from ods (or whatever the native experiment notes file is in). Removes reading metadata yaml requirement
Attempts to write metadata yaml, but catches PermissionError and logs it

Please include a summary of the changes and any issues which are addressed.

Closes #(issue number)

132

Checklist:

[ ] All tests pass on catscan: run pytest --basetemp=tmp -sv -n 8 tests on catscan from the root directory
[x] If needed, docs have been update: docs/source has been updated for any added, moved, or removed files
[x] Docs build with no errors: run make clean & make html from the docs folder
[x] No python formatting errors: run flake8 nsds_lab_to_nwb tests from the root directory