BouchardLab / nsds_lab_to_nwb

Python package to convert NSDS Lab data to NWB files.
https://nsds-lab-to-nwb.readthedocs.io/en/latest/
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more metadata fix #74

Closed jihyunbak closed 3 years ago

jihyunbak commented 3 years ago

Description and related issues

This PR fixes various metadata issues.

Closes #55 Closes #66 Closes #53 Resolves already closed issue #48 Closes #47

Checklist:

jihyunbak commented 3 years ago

This PR is ready for review again. @JesseLivezey @jthermiz

jihyunbak commented 3 years ago

@JesseLivezey Here's the output from test_catscan.py. Lines are hard truncated to my window width...

==================================== short test summary info =====================================
FAILED test_catscan.py::test_nwb_builder[RVG16_B04] - FileNotFoundError: [Errno 2] No such file...
FAILED test_catscan.py::test_nwb_builder[RVG16_B02] - FileNotFoundError: [Errno 2] No such file...
FAILED test_catscan.py::test_nwb_builder[RVG16_B05] - FileNotFoundError: [Errno 2] No such file...
FAILED test_catscan.py::test_nwb_builder[RVG16_B09] - ValueError: Stimulus type 'nan' not found.
FAILED test_catscan.py::test_nwb_builder[RVG16_B10] - ValueError: Unknown stimulus type '{stim_...
FAILED test_catscan.py::test_nwb_builder[RVG16_B07] - OSError: Unable to open file (unable to o...
FAILED test_catscan.py::test_nwb_builder[RVG16_B06] - OSError: Unable to open file (unable to o...
FAILED test_catscan.py::test_nwb_builder[RVG16_B08] - FileNotFoundError: [Errno 2] No such file...
FAILED test_catscan.py::test_legacy_nwb_builder[R56_B10] - OSError: Unable to open file (unable...
============================ 9 failed, 3 passed in 140.03s (0:02:20) ============================